Sains Malaysiana 42(7)(2013):
921–926
Peninsular Malaysia’s Negrito Orang Asli and Its Theory of African
Origin
(Orang Asli Negrito di Semenanjung Malaysia dan
Teori Asal Usul Afrika)
Endom Ismail*, Farahnaz Amini, Shairah Abdul Razak &
Husna Mohd Zaini
School of
Bioscience and Biotechnology, Faculty of Science and Technology
Universiti
Kebangsaan Malaysia, 43600 Bangi, Selangor D.E., Malaysia
Bin Alwi Zilfalil
School of Medical Sciences, Universiti Sains Malaysia, 16150
Kubang Kerian,
Kelantan, Malaysia
Reza Farhour
Saint James School of Medicine, Albert Lake Drive, The
Quarter, A-1 2640,Anguilla
Received: 24 August 2012/Accepted: 4
December 2012
ABSTRACT
Negritos of Peninsular Malaysia have physical features which strongly resemble the African pygmies rather
than any of the other main South East Asian ethnic groups. In addition, their
features are also completely different from the two other large sub-groups of
the Peninsular Malaysia Orang Asli, i.e. Senoi and Proto-Malay. In this study,
we genetically screened three African-specific markers, Glucose-6 Phosphate
Dehydrogenase (G6PD) gene PvuII Type 2 polymorphism and
A- mutation; and Sickle Cell trait in 103 unrelated individuals with G6PD deficiency.
None of the Negritos’ samples carried A- and Sickle cell mutations but all
males and females have the PvuII Type 2 polymorphism. The same results were
seen in all DNA samples of the Malaysian’s Malay, Chinese and
Indians. Additionally, all females in this study were homozygous for PvuII Type
2 polymorphism. Thus, we concluded that this polymorphism is widespread in all
Malaysian population and is not unique to just Africans. However, these
findings indicated that the polymorphism was widely conserved and can be used
to study the African descendant in any world population hitherto supporting the
‘Out of Africa’ theory.
Keywords: G6PD;
Malaysia; Negrito; Orang Asli
ABSTRAK
Negrito di Semenanjung Malaysia mempunyai
ciri-ciri fizikal yang sangat menyerupai orang Pigmi di Afrika berbanding
kumpulan etnik lain di Asia Tenggara. Sebagai tambahan, ciri-ciri mereka juga secara keseluruhannya
berbeza berbanding dua lagi sub-kumpulan Orang Asli di Semenanjung Malaysia
iaitu Senoi dan Melayu-Proto. Dalam kajian ini, kami membuat penyaringan
genetik menggunakan tiga penanda khas populasi Afrika,
polimorfisme PvuII Type 2 dan mutasi A- untuk G6PD gen
serta mutasi sel sabit ke atas 103 individu tak bersaudara yang mengalami
kekurangan G6PD. Kesemua sampel Negrito tidak
membawa mutasi A- dan sel sabit tetapi kesemua lelaki dan perempuan dalam kajian
ini mempunyai polimorfisme PvuII Type 2. Hasil yang sama dicerap dalam semua sampel DNA Melayu, Cina dan India di
Malaysia. Tambahan lagi, semua perempuan dalam kajian ini
homozigus bagi polimorfisme PvuII Type 2. Oleh itu,
kami menyimpulkan bahawa polimorfisma ini tersebar luas dalam kesemua populasi
Malaysia dan tidak khusus untuk orang Afrika sahaja. Walau
bagaimanapun, penemuan kajian ini memberi petunjuk bahawa polimorfisme ini
terpelihara secara meluas dan boleh digunakan untuk mengkaji keturunan Afrika
bagi mana-mana populasi dunia, seterusnya menyokong teori ‘Out of Africa’.
Kata kunci: G6PD;
Malaysia; Negrito; Orang Asli
REFERENCES
Abdulla, M.A., Ahmed, I., Assawamakin,
A., Bhak, J., Brahmachari, S.K., Calacal, G.C., Chaurasia, A., Chen, C.H.,
Chen, J., Chen, Y.T., Chu, J., Cutiongco-de la Paz, E.V.M.C., De Ungria,
M.C.A., Delfin, F.C., Edo, J., Fuchareon, S., Ghang, H., Gojobori, T., Han, J.,
Ho, S.F., Hoh, B.P., Huang, W., Inoko, H., Jha, P., Jinam, T.A., Jin, L., Jung,
J., Kangwanpong, D., Kampuansai, J.C., Kennedy, G.C., Khurana, P., Kim, H.L.,
Kim, K., Kim, S., Kim, W.Y., Kimm, K., Kimura, R., Koike, T., Kulawonganunchai,
S., Kumar, V., Lai, P.S., Lee, J.Y., Lee, S., Liu, E.T., Majumder, P.P., Kumar,
M., Marzuki, S., Mitchell, W., Mukerji, M., Naritomi, K., Ngamphiw, C.,
Niikawa, N., Nishida, N., Oh, B., Oh, S., Ohashi, J., Oka, A., Ong, R.,
Padilla, C.D., Palittapongarnpim, P., Perdigon, H.B., Phipps, M.E., Png, E.,
Sakaki, Y., Salvador, J.M., Sandraling, Y., Scaria, V., Seielstad, M., Sidek,
M.R., Sinha, A., Srikummool, M., Sudoyo, H., Sugano, S., Suryadi, H., Suzuki,
Y., Tabbada, K.A., Tan, A., Tokunaga, K., Tongsima, S., Villamor, L.P., Wang,
E., Ying, W.Y., Wang, H., Wu, J.Y., Xiao, H., Xu, S., Yang, J.O., Shugart,
Y.Y., Yoo, H.S., Yuan, W., Zhao, G. & Zilfalil, A. 2009. Mapping human
genetic diversity in Asia. Science 326: 1541-1545.
Ainoon, O., Boo,
N.Y., Yu, Y.H., Cheong, S.K., Hamidah, H.N. & Lim, J.H. 2004. Complete molecular characterisation of
glucose-6-phosphate dehydrogenase (G6PD) deficiency in a group of Malaysian
Chinese neonates. Malays. J. Pathology 26(2): 89-98.
Ainoon, O., Yu, Y.H., Amir Muhriz,
A.L., Boo, N.Y., Cheong, S.K. & Hamidah, N.H. 2003. Glucose-6-phosphate
dehydrogenase (G6PD) variants in Malaysian Malays. Human Mutation 21(1):
101.
Ainoon, O., Yu, Y.H., Amir Muhriz,
A.L., Boo, N.Y., Cheong, S.K. & Hamidah, N.H. 2002. Glucose-6-phosphate
dehydrogenase (G6PD) variants in Malaysian Malays. Human Mutation 21:
101-109.
Ainoon, O., Joyce, J., Boo, N.Y.,
Cheong, S.K., Zainal, Z.A. & Hamidah, N.H. 1999. Glucose-6-phosphate
dehydrogenase (G6PD) variants in Malaysian Chinese. Human Mutation 14(4):
352.
Amini, F., Ismail, E.
& Zilfalil, B.A. 2011. Prevalence and molecular study of G6PD deficiency in Malaysian
Orang Asli. Internal Medicine J. 41(4): 351-353.
Balgir, R.S. 2010. Genetic
diversity of hemoglobinopathies, G6PD deficiency, and ABO and Rhesus blood
groups in two isolates of a primitive Kharia Tribe in Sundargarh District of
Northwestern Orissa, India. Community Genetics 1: 117-123.
Beutler, E. & Kuhl, W. 1990.
Linkage between a PvuII restriction fragment length polymorphism and G6PD
A-202A/376G: Evidence for a single origin of the common G6PD A- mutation. Human
Genetics 85(1): 9-11.
Beutler, E. & Vulliamy, T.J. 2002.
Hematologically important mutations: Glucose-6-phosphate dehydrogenase. Blood
Cells Molecular 28(2): 93-103.
Beutler, E., Kuhl, W., Ramirez, E.
& Lisker, R. 1991. Some Mexican glucose-6-phosphate dehydrogenase variants
revisited. Human Genetics 86(4): 371-374.
Chockkalingam, K. & Board, P.G.
1980. Further evidence for heterogeneity of
glucose-6-phosphate dehydrogenase deficiency in Papua New Guinea. Human
Genetics 56: 209-212.
Coetzee, M.J.,
Bartleet, S.C., Ramsay, M. & Jenkins, T. 1992. Glucose-6-phosphate dehydrogenase (G6PD)
electrophoretic variants and the PvuII polymorphism in southern African
populations. Human Genetics 89(1): 111-113.
Denic, S. & Nicholls, M.G. 2007. Genetic benefits of consanguinity through selection of genotypes
protective against malaria. Human Biology 79(2): 145-158.
Fey, M.F., Wainscoat,
J.S., Mukwala, E.C., Falusi, A.G., Vulliamy, T.J. & Luzzatto, L. 1990. A PvuII restriction fragment length polymorphism of the
glucose-6-phosphate dehydrogenase gene is an African-specific marker. Human
Genetics 84(5): 471-472.
Hue, N.T., Charlieu, J.P., Chau, T.T., Day, N., Farrar, J.J.,
Hien, T.T. & Dunstan, S.J. 2009. Glucose-6-phosphate
dehydrogenase (G6PD) mutations and haemoglobinuria syndrome in the Vietnamese
population. Malaria Journal 8: 152.
Iwai, K., Hirono, A., Matsuoka, H.,
Kawamoto, F., Horie, T., Lin, K., Tantular, I.S., Dachlan, Y.P., Notopuro, H.,
Hidayah, N.I., Salim, A.M., Fujii, H., Miwa, S. & Ishii, A. 2001. Distribution of glucose-6-phosphate dehydrogenase mutations in
Southeast Asia. Human Genetics 108: 445-449.
Joseph, R., Ho, L.Y.,
Gomez, J.M., Rajdurai, V.S., Sivasankaran, S. & Yip, Y.Y. 1999. Mass newborn screening for
glucose-6-phosphate dehydrogenase deficiency in Singapore. Southeast
Asian Journal Tropical Medical Public Health 30(Suppl. 2): 70-71.
Kay, A.C., Kuhl, W., Prchal, J. &
Beutler, E. 1992. The origin of
glucose-6-phosphate-dehydrogenase (G6PD) polymorphisms in African-Americans. American J. Human Genetics 50(2): 394-398.
Louicharoen, C. & Nuchprayoon, I.
2005. G6PD Viangchan (871G>A) is the most common G6PD-deficient variant in
the Cambodian population. Journal Human Genetics 50: 448-452.
Manco, L., Botigué, L.R., Ribeiro, M.L.
& Abade, A. 2007. G6PD deficient alleles and haplotype
analysis of human G6PD locus in São Tomé e Príncipe (West Africa). Human
Biology 79(6): 679-686.
Matsuoka, H., Arai, M., Yoshida, S.,
Tantular, I.S., Pusarawati, S., Kerong, H. & Kawamoto, F. 2003. Five
different glucose-6-phosphate dehydrogenase (G6PD) variants found among 11
G6PD-deficient persons in Flores Island, Indonesia. Journal Human Genetics 48:
541-544.
Matsuoka, H., Wang,
J., Hirai, M., Arai, M., Yoshida, S., Kobayashi, T., Jalloh, A., Lin, K. &
Kawamoto, F. 2004. Glucose-6-phosphate dehydrogenase
(G6PD) mutations in Myanmar: G6PD Mahidol (487G>A) is the most common
variant in the Myanmar population. Journal Human Genetics 49: 544-547.
Meilleur, K.G., Coulibaly, S., Traoré,
M., Landouré, G., La Pean, A., Sangaré, M., Mochel, F., Traoré, S., Fischbeck,
K.H. & Han, H.R. 2011. Genetic testing and counseling for hereditary
neurological diseases in Mali. J. Community Genetics 2: 33-42.
Miller, S.A. & Dykes, D.D. 1988. A simple salting out procedure for extracting DNA from human
nucleated cells. Nucleic Acids Research 16(3): 1215.
Nuchprayoon, I., Louicharoen, C. & Charoenvej, W. 2008. Glucose-6-phosphate dehydrogenase mutations in Mon and Burmese of
southern Myanmar. Journal Human Genetics 53(1):
48-54.
Nuchprayoon, I., Sanpavat, S. &
Nuchprayoon, S. 2002. Glucose-6-phosphate dehydrogenase (G6PD) mutations in Thailand:
G6PD Viangchan (871G>A) is the most common deficiency variant in the Thai
population. Human Mutation 19: 185.
Padilla, C.,
Nishiyama, K., Shirakawa, T. & Matsuo, M. 2003. Screening for glucose-6-phosphate dehydrogenase deficiency
using a modified formazan method: A pilot study on Filipino male newborns. Pediatic
International 45: 10-15.
Poon, M.C., Hall, K.,
Scott, C.W. & Prchal, J.T. 1988. G6PD
Viangchan: A new glucose 6-phosphate dehydrogenase variant from Laos. Human
Genetics 78: 98-99.
Saad, S.T., Salles, T.S., Carvalho,
M.H. & Costa, F.F. 1997. Molecular characterization of
glucose-6-phosphate dehydrogenase deficiency in Brazil. Human
Heredity 47(1): 17-21.
Shi, H., Dong, Y., Wen, B., Xiao, C.J.,
Underhill, P.A., Shen, P., Chakraborty, R., Jin, L. & Su, B. 2005. Y-chromosome evidence of southern origin of the East Asian-specific
haplogroup O3-M122. American J. Human Genetics 77: 408-419.
Tishkoff, S.A., Varkonyi, R.,
Cahinhinan, N., Abbes, S., Argyropoulos, G., Destro-Bisol, G., Drousiotou, A.,
Dangerfield, B., Lefranc, G., Loiselet, J., Piro, A., Stoneking, M., Tagarelli,
A., Tagarelli, G., Touma, E.H., Williams, S.M. & Clark, A.G. 2001. Haplotype
diversity and linkage disequilibrium at human G6PD: Recent origin of alleles
that confer malarial resistance. Science 293(5529): 455-462.
*Corresponding author; email: eismail@ukm.my
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